IL_6V3B_103
3D structure
- PDB id
- 6V3B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- CCUCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3B_103 not in the Motif Atlas
- Homologous match to IL_4WF9_101
- Geometric discrepancy: 0.0972
- The information below is about IL_4WF9_101
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
6V3B|1|AN1|C|2676
6V3B|1|AN1|C|2677
6V3B|1|AN1|U|2678
6V3B|1|AN1|C|2679
6V3B|1|AN1|U|2680
*
6V3B|1|AN1|A|2721
6V3B|1|AN1|U|2722
6V3B|1|AN1|G|2723
Current chains
- Chain AN1
- 23s ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L14
- Chain M
- 50S ribosomal protein L17
- Chain O
- 50S ribosomal protein L19
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