IL_6V3B_152
3D structure
- PDB id
- 6V3B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.91 Å
Loop
- Sequence
- GGAGUACG*UAAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3B_152 not in the Motif Atlas
- Homologous match to IL_5J7L_038
- Geometric discrepancy: 0.0975
- The information below is about IL_5J7L_038
- Detailed Annotation
- 8x6 Sarcin-Ricin with inserted Y; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_41756.4
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
6V3B|1|sN1|G|884
6V3B|1|sN1|G|885
6V3B|1|sN1|A|886
6V3B|1|sN1|G|887
6V3B|1|sN1|U|888
6V3B|1|sN1|A|889
6V3B|1|sN1|C|890
6V3B|1|sN1|G|891
*
6V3B|1|sN1|U|902
6V3B|1|sN1|A|903
6V3B|1|sN1|A|904
6V3B|1|sN1|A|905
6V3B|1|sN1|A|906
6V3B|1|sN1|C|907
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
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