IL_6V3D_085

3D structure

PDB id

6V3D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Acinetobacter baumannii Ribosome: 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

GAUAGGUGGGAGGCUUUGAAGC*GUGGAGCCGUCC

Length

34 nucleotides

Bulged bases

6V3D|1|AN1|U|2114, 6V3D|1|AN1|A|2115, 6V3D|1|AN1|U|2118, 6V3D|1|AN1|G|2120, 6V3D|1|AN1|U|2128

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6V3D|1|AN1|G|2112
6V3D|1|AN1|A|2113
6V3D|1|AN1|U|2114
6V3D|1|AN1|A|2115
6V3D|1|AN1|G|2116
6V3D|1|AN1|G|2117
6V3D|1|AN1|U|2118
6V3D|1|AN1|G|2119
6V3D|1|AN1|G|2120
6V3D|1|AN1|G|2121
6V3D|1|AN1|A|2122
6V3D|1|AN1|G|2123
6V3D|1|AN1|G|2124
6V3D|1|AN1|C|2125
6V3D|1|AN1|U|2126
6V3D|1|AN1|U|2127
6V3D|1|AN1|U|2128
6V3D|1|AN1|G|2129
6V3D|1|AN1|A|2130
6V3D|1|AN1|A|2131
6V3D|1|AN1|G|2132
6V3D|1|AN1|C|2133
*
6V3D|1|AN1|G|2150
6V3D|1|AN1|U|2151
6V3D|1|AN1|G|2152
6V3D|1|AN1|G|2153
6V3D|1|AN1|A|2154
6V3D|1|AN1|G|2155
6V3D|1|AN1|C|2156
6V3D|1|AN1|C|2157
6V3D|1|AN1|G|2158
6V3D|1|AN1|U|2159
6V3D|1|AN1|C|2160
6V3D|1|AN1|C|2161

Current chains

Chain AN1

23s ribosomal RNA

Nearby chains