IL_6V3E_024
3D structure
- PDB id
- 6V3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3E_024 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.1799
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
6V3E|1|sN1|C|566
6V3E|1|sN1|G|567
6V3E|1|sN1|U|568
6V3E|1|sN1|A|569
6V3E|1|sN1|A|570
6V3E|1|sN1|A|571
6V3E|1|sN1|G|572
*
6V3E|1|sN1|C|877
6V3E|1|sN1|G|878
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain e
- 30S ribosomal protein S5
- Chain l
- 30S ribosomal protein S12
- Chain q
- 30S ribosomal protein S17
Coloring options: