IL_6V3E_033
3D structure
- PDB id
- 6V3E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Acinetobacter baumannii Ribosome: 30S subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.4 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 6V3E|1|sN1|A|699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6V3E_033 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.2852
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6V3E|1|sN1|G|680
6V3E|1|sN1|U|681
6V3E|1|sN1|G|682
6V3E|1|sN1|U|683
6V3E|1|sN1|A|684
6V3E|1|sN1|G|685
*
6V3E|1|sN1|C|696
6V3E|1|sN1|G|697
6V3E|1|sN1|U|698
6V3E|1|sN1|A|699
6V3E|1|sN1|G|700
6V3E|1|sN1|A|701
6V3E|1|sN1|G|702
6V3E|1|sN1|A|703
6V3E|1|sN1|U|704
Current chains
- Chain sN1
- 16s Ribosomal RNA
Nearby chains
- Chain k
- 30S ribosomal protein S11
Coloring options: