IL_6VLZ_035

3D structure

PDB id

6VLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

6VLZ|1|A|A|2926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6VLZ_035 not in the Motif Atlas

Homologous match to IL_4WF9_081

Geometric discrepancy: 0.1689

The information below is about IL_4WF9_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

6VLZ|1|A|G|2733
6VLZ|1|A|A|2734
*
6VLZ|1|A|U|2925
6VLZ|1|A|A|2926
6VLZ|1|A|C|2927
6VLZ|1|A|C|2928

Current chains

Chain A

16s rRNA

Nearby chains

Chain d

39S ribosomal protein L45, mitochondrial