IL_6VLZ_039
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- UAAG*CAAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_039 not in the Motif Atlas
- Geometric match to IL_5AOX_003
- Geometric discrepancy: 0.2798
- The information below is about IL_5AOX_003
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
6VLZ|1|A|U|2857
6VLZ|1|A|A|2858
6VLZ|1|A|A|2859
6VLZ|1|A|G|2860
*
6VLZ|1|A|C|2872
6VLZ|1|A|A|2873
6VLZ|1|A|A|2874
6VLZ|1|A|A|2875
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain P
- Mitochondrial ribosomal protein L18, isoform CRA_b
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: