IL_6VLZ_087
3D structure
- PDB id
- 6VLZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.97 Å
Loop
- Sequence
- CG*UCAAG
- Length
- 7 nucleotides
- Bulged bases
- 6VLZ|1|AA|C|1330, 6VLZ|1|AA|A|1331
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VLZ_087 not in the Motif Atlas
- Geometric match to IL_3RW6_003
- Geometric discrepancy: 0.2456
- The information below is about IL_3RW6_003
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_24264.1
- Basepair signature
- cWW-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
6VLZ|1|AA|C|1262
6VLZ|1|AA|G|1263
*
6VLZ|1|AA|U|1329
6VLZ|1|AA|C|1330
6VLZ|1|AA|A|1331
6VLZ|1|AA|A|1332
6VLZ|1|AA|G|1333
Current chains
- Chain AA
- 12s rRNA
Nearby chains
- Chain AC
- 28S ribosomal protein S24, mitochondrial
- Chain AD
- 28S ribosomal protein S5, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain AK
- 28S ribosomal protein S14, mitochondrial
Coloring options: