IL_6VU3_196
3D structure
- PDB id
- 6VU3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UUAC*GUA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VU3_196 not in the Motif Atlas
- Geometric match to IL_8C3A_419
- Geometric discrepancy: 0.3613
- The information below is about IL_8C3A_419
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_47767.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6VU3|1|a|U|1411
6VU3|1|a|U|1412
6VU3|1|a|A|1413
6VU3|1|a|C|1414
*
6VU3|1|a|G|1588
6VU3|1|a|U|1589
6VU3|1|a|A|1590
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: