IL_6VWN_074

3D structure

PDB id

6VWN (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

6VWN|1|2|G|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VWN|1|2|C|274
6VWN|1|2|C|275
6VWN|1|2|U|276
6VWN|1|2|G|277
6VWN|1|2|A|278
6VWN|1|2|A|279
6VWN|1|2|U|280
6VWN|1|2|C|281
*
6VWN|1|2|G|359
6VWN|1|2|U|360
6VWN|1|2|G|361
6VWN|1|2|A|362
6VWN|1|2|G|363

Current chains

Chain 2

23S ribosomal RNA

Nearby chains