IL_6VWN_145
3D structure
- PDB id
- 6VWN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AUGUGUAGGAUAGGU*ACCCUU
- Length
- 21 nucleotides
- Bulged bases
- 6VWN|1|2|U|2111, 6VWN|1|2|U|2118
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VWN|1|2|A|2108
6VWN|1|2|U|2109
6VWN|1|2|G|2110
6VWN|1|2|U|2111
6VWN|1|2|G|2112
6VWN|1|2|U|2113
6VWN|1|2|A|2114
6VWN|1|2|G|2115
6VWN|1|2|G|2116
6VWN|1|2|A|2117
6VWN|1|2|U|2118
6VWN|1|2|A|2119
6VWN|1|2|G|2120
6VWN|1|2|G|2121
6VWN|1|2|U|2122
*
6VWN|1|2|A|2176
6VWN|1|2|C|2177
6VWN|1|2|C|2178
6VWN|1|2|C|2179
6VWN|1|2|U|2180
6VWN|1|2|U|2181
Current chains
- Chain 2
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: