IL_6VYU_047
3D structure
- PDB id
- 6VYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- GCU*GC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VYU_047 not in the Motif Atlas
- Homologous match to IL_4LFB_043
- Geometric discrepancy: 0.0951
- The information below is about IL_4LFB_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6VYU|1|D|G|1050
6VYU|1|D|C|1051
6VYU|1|D|U|1052
*
6VYU|1|D|G|1206
6VYU|1|D|C|1208
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S3
- Chain S
- 30S ribosomal protein S14
Coloring options: