IL_6VYU_147
3D structure
- PDB id
- 6VYU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7 Å
Loop
- Sequence
- ACG*CUAU
- Length
- 7 nucleotides
- Bulged bases
- 6VYU|1|a|C|2055, 6VYU|1|a|U|2613
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VYU_147 not in the Motif Atlas
- Homologous match to IL_5J7L_321
- Geometric discrepancy: 0.1049
- The information below is about IL_5J7L_321
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83389.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6VYU|1|a|A|2054
6VYU|1|a|C|2055
6VYU|1|a|G|2056
*
6VYU|1|a|C|2612
6VYU|1|a|U|2613
6VYU|1|a|A|2614
6VYU|1|a|U|2615
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
- Chain j
- 50S ribosomal protein L3
Coloring options: