IL_6VYU_192

3D structure

PDB id

6VYU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

6VYU|1|D|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYU|1|D|G|144
6VYU|1|D|G|145
6VYU|1|D|G|146
6VYU|1|D|G|147
6VYU|1|D|G|148
6VYU|1|D|A|149
6VYU|1|D|U|150
6VYU|1|D|A|151
6VYU|1|D|A|152
6VYU|1|D|C|153
*
6VYU|1|D|G|168
6VYU|1|D|C|169
6VYU|1|D|U|170
6VYU|1|D|A|171
6VYU|1|D|A|172
6VYU|1|D|U|173
6VYU|1|D|A|174
6VYU|1|D|C|175
6VYU|1|D|C|176
6VYU|1|D|G|177
6VYU|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20