IL_6VYX_098

3D structure

PDB id

6VYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex C4 (TTC-C4) containing mRNA with a 21 nt long spacer, transcription factor NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GGGG*CUUAC

Length

9 nucleotides

Bulged bases

6VYX|1|a|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VYX|1|a|G|880
6VYX|1|a|G|881
6VYX|1|a|G|882
6VYX|1|a|G|883
*
6VYX|1|a|C|893
6VYX|1|a|U|894
6VYX|1|a|U|895
6VYX|1|a|A|896
6VYX|1|a|C|897

Current chains

Chain a

23S rRNA

Nearby chains

Chain v

50S ribosomal protein L16