IL_6VZ3_051
3D structure
- PDB id
- 6VZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 8.9 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6VZ3_051 not in the Motif Atlas
- Homologous match to IL_4LFB_047
- Geometric discrepancy: 0.0737
- The information below is about IL_4LFB_047
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
6VZ3|1|D|G|1061
6VZ3|1|D|U|1062
6VZ3|1|D|C|1063
*
6VZ3|1|D|G|1193
6VZ3|1|D|U|1194
6VZ3|1|D|C|1195
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S3
- Chain K
- 30S ribosomal protein S5
- Chain P
- 30S ribosomal protein S10
- Chain S
- 30S ribosomal protein S14
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