IL_6VZ7_192

3D structure

PDB id

6VZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

GGGGGAUAAC*GCUAAUACCGC

Length

21 nucleotides

Bulged bases

6VZ7|1|D|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VZ7|1|D|G|144
6VZ7|1|D|G|145
6VZ7|1|D|G|146
6VZ7|1|D|G|147
6VZ7|1|D|G|148
6VZ7|1|D|A|149
6VZ7|1|D|U|150
6VZ7|1|D|A|151
6VZ7|1|D|A|152
6VZ7|1|D|C|153
*
6VZ7|1|D|G|168
6VZ7|1|D|C|169
6VZ7|1|D|U|170
6VZ7|1|D|A|171
6VZ7|1|D|A|172
6VZ7|1|D|U|173
6VZ7|1|D|A|174
6VZ7|1|D|C|175
6VZ7|1|D|C|176
6VZ7|1|D|G|177
6VZ7|1|D|C|178

Current chains

Chain D

16S rRNA

Nearby chains

Chain E

30S ribosomal protein S20