IL_6VZ7_201

3D structure

PDB id

6VZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation complex C1 (TTC-C1) containing a 27 nt long mRNA spacer, NusG, and fMet-tRNAs at P-site and E-site

Experimental method

ELECTRON MICROSCOPY

Resolution

7 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

6VZ7|1|a|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6VZ7|1|a|G|2123
6VZ7|1|a|G|2124
6VZ7|1|a|G|2125
6VZ7|1|a|A|2126
6VZ7|1|a|G|2127
*
6VZ7|1|a|C|2161
6VZ7|1|a|G|2162
6VZ7|1|a|A|2163
6VZ7|1|a|C|2164
6VZ7|1|a|C|2165
6VZ7|1|a|U|2166
6VZ7|1|a|U|2167
6VZ7|1|a|G|2168
6VZ7|1|a|A|2169
6VZ7|1|a|A|2170
6VZ7|1|a|A|2171
6VZ7|1|a|U|2172
6VZ7|1|a|A|2173
6VZ7|1|a|C|2174
6VZ7|1|a|C|2175

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA