IL_6W6K_023

3D structure

PDB id

6W6K (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Activated-high-Mg2+

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6K_023 not in the Motif Atlas

Homologous match to IL_5J7L_021

Geometric discrepancy: 0.4583

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

6W6K|1|A|C|440
6W6K|1|A|A|441
6W6K|1|A|G|442
*
6W6K|1|A|C|492
6W6K|1|A|A|493
6W6K|1|A|G|494
6W6K|1|A|A|495
6W6K|1|A|A|496
6W6K|1|A|G|497

Current chains

Chain A

16S rRNA

Nearby chains

Chain D

30S ribosomal protein S4