IL_6W6L_028

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GGUC*GCUAC

Length

9 nucleotides

Bulged bases

6W6L|1|t|A|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|437
6W6L|1|t|G|438
6W6L|1|t|U|439
6W6L|1|t|C|440
*
6W6L|1|t|G|1283
6W6L|1|t|C|1284
6W6L|1|t|U|1285
6W6L|1|t|A|1286
6W6L|1|t|C|1287

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain 7

Coiled-coil domain-containing protein 47

Chain D

5.8S ribosomal RNA; 5.8S rRNA

Chain f

60S ribosomal protein L32

Chain g

60S ribosomal protein L35a