IL_6W6L_045

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GCUGGGAAGG*CAGCAGCACUCGC

Length

23 nucleotides

Bulged bases

6W6L|1|t|U|719, 6W6L|1|t|G|720, 6W6L|1|t|A|922, 6W6L|1|t|C|923

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|717
6W6L|1|t|C|718
6W6L|1|t|U|719
6W6L|1|t|G|720
6W6L|1|t|G|721
6W6L|1|t|G|722
6W6L|1|t|A|723
6W6L|1|t|A|724
6W6L|1|t|G|725
6W6L|1|t|G|726
*
6W6L|1|t|C|915
6W6L|1|t|A|916
6W6L|1|t|G|917
6W6L|1|t|C|918
6W6L|1|t|A|919
6W6L|1|t|G|920
6W6L|1|t|C|921
6W6L|1|t|A|922
6W6L|1|t|C|923
6W6L|1|t|U|924
6W6L|1|t|C|925
6W6L|1|t|G|926
6W6L|1|t|C|927

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain H

60S ribosomal protein L7

Chain N

60S ribosomal protein L14

Chain T

60S ribosomal protein L18a