IL_6W6L_048

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GGAAGGUGG*UGUUACAGCC

Length

19 nucleotides

Bulged bases

6W6L|1|t|A|737

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|735
6W6L|1|t|G|736
6W6L|1|t|A|737
6W6L|1|t|A|738
6W6L|1|t|G|739
6W6L|1|t|G|740
6W6L|1|t|U|741
6W6L|1|t|G|742
6W6L|1|t|G|743
*
6W6L|1|t|U|898
6W6L|1|t|G|899
6W6L|1|t|U|900
6W6L|1|t|U|901
6W6L|1|t|A|902
6W6L|1|t|C|903
6W6L|1|t|A|904
6W6L|1|t|G|905
6W6L|1|t|C|906
6W6L|1|t|C|907

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain N

60S ribosomal protein L14

Chain T

60S ribosomal protein L18a