IL_6W6L_170

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

GGCCGUGUCG*CCGGACCGGCGAC

Length

23 nucleotides

Bulged bases

6W6L|1|t|C|660

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|G|481
6W6L|1|t|G|482
6W6L|1|t|C|483
6W6L|1|t|C|484
6W6L|1|t|G|485
6W6L|1|t|U|486
6W6L|1|t|G|487
6W6L|1|t|U|488
6W6L|1|t|C|489
6W6L|1|t|G|490
*
6W6L|1|t|C|651
6W6L|1|t|C|652
6W6L|1|t|G|653
6W6L|1|t|G|654
6W6L|1|t|A|655
6W6L|1|t|C|656
6W6L|1|t|C|657
6W6L|1|t|G|658
6W6L|1|t|G|659
6W6L|1|t|C|660
6W6L|1|t|G|661
6W6L|1|t|A|662
6W6L|1|t|C|663

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain R

60S ribosomal protein L18

Chain r

60S ribosomal protein L28