IL_6W6L_173

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

6W6L|1|t|G|1342, 6W6L|1|t|C|1361

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|C|1340
6W6L|1|t|G|1341
6W6L|1|t|G|1342
6W6L|1|t|G|1343
6W6L|1|t|G|1344
*
6W6L|1|t|C|1359
6W6L|1|t|G|1360
6W6L|1|t|C|1361
6W6L|1|t|C|1362
6W6L|1|t|G|1363
6W6L|1|t|U|1364
6W6L|1|t|G|1365

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain M

60S ribosomal protein L13

Chain O

60S ribosomal protein L15

Chain b

60S ribosomal protein L27a