IL_6W6L_176

3D structure

PDB id

6W6L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human ribosome-TMCO1 translocon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.84 Å

Loop

Sequence

CUGAAUGUCAAAGU*AAUGAAGCGCG

Length

25 nucleotides

Bulged bases

6W6L|1|t|A|3682

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6W6L|1|t|C|3679
6W6L|1|t|U|3680
6W6L|1|t|G|3681
6W6L|1|t|A|3682
6W6L|1|t|A|3683
6W6L|1|t|U|3684
6W6L|1|t|G|3685
6W6L|1|t|U|3686
6W6L|1|t|C|3687
6W6L|1|t|A|3688
6W6L|1|t|A|3689
6W6L|1|t|A|3690
6W6L|1|t|G|3691
6W6L|1|t|U|3692
*
6W6L|1|t|A|3703
6W6L|1|t|A|3704
6W6L|1|t|U|3705
6W6L|1|t|G|3706
6W6L|1|t|A|3707
6W6L|1|t|A|3708
6W6L|1|t|G|3709
6W6L|1|t|C|3710
6W6L|1|t|G|3711
6W6L|1|t|C|3712
6W6L|1|t|G|3713

Current chains

Chain t

28S ribosomal RNA

Nearby chains

Chain A

60S ribosomal protein L8

Chain j

60S ribosomal protein L36

Chain p

60S ribosomal protein L36a

Chain v

Transfer RNA; tRNA