IL_6W6P_001
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_001 not in the Motif Atlas
- Geometric match to IL_4WF9_001
- Geometric discrepancy: 0.0684
- The information below is about IL_4WF9_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.2
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 11
Unit IDs
6W6P|1|A|G|25
6W6P|1|A|U|26
6W6P|1|A|G|27
6W6P|1|A|G|28
6W6P|1|A|A|29
6W6P|1|A|U|30
6W6P|1|A|G|31
*
6W6P|1|A|C|549
6W6P|1|A|U|550
6W6P|1|A|G|551
6W6P|1|A|A|552
6W6P|1|A|A|553
6W6P|1|A|A|554
6W6P|1|A|C|555
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L32
- Chain R
- 50S ribosomal protein L20
- Chain T
- 50S ribosomal protein L22
Coloring options: