IL_6W6P_012

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCU*AA

Length

5 nucleotides

Bulged bases

6W6P|1|A|C|321

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_012 not in the Motif Atlas

Geometric match to IL_1S03_002

Geometric discrepancy: 0.2565

The information below is about IL_1S03_002

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

67

Unit IDs

6W6P|1|A|U|320
6W6P|1|A|C|321
6W6P|1|A|U|322
*
6W6P|1|A|A|392
6W6P|1|A|A|393

Current chains

Chain A

23S rRNA

Nearby chains