IL_6W6P_024

3D structure

PDB id

6W6P (explore in PDB, NAKB, or RNA 3D Hub)

Description

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W6P_024 not in the Motif Atlas

Homologous match to IL_4WF9_024

Geometric discrepancy: 0.1153

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_15190.3

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

26

Unit IDs

6W6P|1|A|U|743
6W6P|1|A|G|744
6W6P|1|A|A|745
6W6P|1|A|A|746
6W6P|1|A|G|747
*
6W6P|1|A|U|764
6W6P|1|A|G|765
6W6P|1|A|G|766
6W6P|1|A|A|767
6W6P|1|A|G|768

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2