IL_6W6P_063
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGCAAAA*UGAAGUAUA
- Length
- 16 nucleotides
- Bulged bases
- 6W6P|1|A|A|1815, 6W6P|1|A|A|1830, 6W6P|1|A|U|1834
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_063 not in the Motif Atlas
- Homologous match to IL_7RQB_070
- Geometric discrepancy: 0.0877
- The information below is about IL_7RQB_070
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_17069.3
- Basepair signature
- cWW-tSH-tHH-cSS-tWW-tHH-tSS-cWW
- Number of instances in this motif group
- 5
Unit IDs
6W6P|1|A|U|1812
6W6P|1|A|G|1813
6W6P|1|A|C|1814
6W6P|1|A|A|1815
6W6P|1|A|A|1816
6W6P|1|A|A|1817
6W6P|1|A|A|1818
*
6W6P|1|A|U|1827
6W6P|1|A|G|1828
6W6P|1|A|A|1829
6W6P|1|A|A|1830
6W6P|1|A|G|1831
6W6P|1|A|U|1832
6W6P|1|A|A|1833
6W6P|1|A|U|1834
6W6P|1|A|A|1835
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- 50S ribosomal protein L2
Coloring options: