IL_6W6P_124
3D structure
- PDB id
- 6W6P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- MultiBody Refinement of 70S Ribosome from Enterococcus faecalis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6W6P_124 not in the Motif Atlas
- Homologous match to IL_4LFB_020
- Geometric discrepancy: 0.0937
- The information below is about IL_4LFB_020
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.2
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
6W6P|1|a|C|519
6W6P|1|a|G|520
6W6P|1|a|G|521
6W6P|1|a|C|522
6W6P|1|a|U|523
6W6P|1|a|A|524
6W6P|1|a|A|525
6W6P|1|a|C|526
*
6W6P|1|a|G|555
6W6P|1|a|G|556
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
Coloring options: