IL_6W77_041

3D structure

PDB id

6W77 (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactivated-high-Mg2+ Class A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GACAU*AC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W77_041 not in the Motif Atlas

Homologous match to IL_4LFB_039

Geometric discrepancy: 0.2484

The information below is about IL_4LFB_039

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_61370.1

Basepair signature

cWW-cWS-L-cWW-L

Number of instances in this motif group

4

Unit IDs

6W77|1|A|G|993
6W77|1|A|A|994
6W77|1|A|C|995
6W77|1|A|A|996
6W77|1|A|U|997
*
6W77|1|A|A|1044
6W77|1|A|C|1045

Current chains

Chain A

RNA (1519-MER)

Nearby chains

Chain N

30S ribosomal protein S14