3D structure

PDB id
6W77 (explore in PDB, NAKB, or RNA 3D Hub)
Description
30S-Inactivated-high-Mg2+ Class A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UGCAUG*CAUG
Length
10 nucleotides
Bulged bases
6W77|1|A|C|1054
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6W77_044 not in the Motif Atlas
Geometric match to IL_6CZR_365
Geometric discrepancy: 0.2365
The information below is about IL_6CZR_365
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_45699.1
Basepair signature
cWW-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

6W77|1|A|U|1052
6W77|1|A|G|1053
6W77|1|A|C|1054
6W77|1|A|A|1055
6W77|1|A|U|1056
6W77|1|A|G|1057
*
6W77|1|A|C|1203
6W77|1|A|A|1204
6W77|1|A|U|1205
6W77|1|A|G|1206

Current chains

Chain A
RNA (1519-MER)

Nearby chains

Chain C
30S ribosomal protein S3
Chain J
30S ribosomal protein S10
Chain N
30S ribosomal protein S14

Coloring options:


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