IL_6W7M_023

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GAAGGG*CAUUGAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7M_023 not in the Motif Atlas

Geometric match to IL_5J7L_023

Geometric discrepancy: 0.2798

The information below is about IL_5J7L_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70801.1

Basepair signature

cWW-cWW-L-R-tWW-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

6W7M|1|A|G|450
6W7M|1|A|A|451
6W7M|1|A|A|452
6W7M|1|A|G|453
6W7M|1|A|G|454
6W7M|1|A|G|455
*
6W7M|1|A|C|477
6W7M|1|A|A|478
6W7M|1|A|U|479
6W7M|1|A|U|480
6W7M|1|A|G|481
6W7M|1|A|A|482
6W7M|1|A|C|483

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16