IL_6W7M_062

3D structure

PDB id

6W7M (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S-Inactive-high-Mg2+ + carbon layer

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCAC*GUUCCC

Length

10 nucleotides

Bulged bases

6W7M|1|A|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6W7M_062 not in the Motif Atlas

Homologous match to IL_6CZR_149

Geometric discrepancy: 0.2747

The information below is about IL_6CZR_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_93211.1

Basepair signature

cWW-cWS-cWW-L-R-cWW-L

Number of instances in this motif group

2

Unit IDs

6W7M|1|A|G|933
6W7M|1|A|C|934
6W7M|1|A|A|935
6W7M|1|A|C|936
*
6W7M|1|A|G|1379
6W7M|1|A|U|1380
6W7M|1|A|U|1381
6W7M|1|A|C|1382
6W7M|1|A|C|1383
6W7M|1|A|C|1384

Current chains

Chain A

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S7

Chain I

30S ribosomal protein S9