IL_6WD3_129

3D structure

PDB id

6WD3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AUGAAGAAG*UGUAAAGU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WD3|1|3|A|408
6WD3|1|3|U|409
6WD3|1|3|G|410
6WD3|1|3|A|411
6WD3|1|3|A|412
6WD3|1|3|G|413
6WD3|1|3|A|414
6WD3|1|3|A|415
6WD3|1|3|G|416
*
6WD3|1|3|U|427
6WD3|1|3|G|428
6WD3|1|3|U|429
6WD3|1|3|A|430
6WD3|1|3|A|431
6WD3|1|3|A|432
6WD3|1|3|G|433
6WD3|1|3|U|434

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain I

30S ribosomal protein S4