IL_6WD5_175
3D structure
- PDB id
- 6WD5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure II-C1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UUAG*CAAAAA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WD5_175 not in the Motif Atlas
- Homologous match to IL_7A0S_008
- Geometric discrepancy: 0.5886
- The information below is about IL_7A0S_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.4
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6WD5|1|1|U|292
6WD5|1|1|U|293
6WD5|1|1|A|294
6WD5|1|1|G|295
*
6WD5|1|1|C|343
6WD5|1|1|A|344
6WD5|1|1|A|345
6WD5|1|1|A|346
6WD5|1|1|A|347
6WD5|1|1|A|348
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain u
- 50S ribosomal protein L24
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