IL_6WDB_164

3D structure

PDB id

6WDB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

6WDB|1|3|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDB|1|3|A|1246
6WDB|1|3|U|1247
6WDB|1|3|A|1248
6WDB|1|3|C|1249
6WDB|1|3|A|1250
6WDB|1|3|A|1251
6WDB|1|3|A|1252
6WDB|1|3|G|1253
*
6WDB|1|3|C|1284
6WDB|1|3|A|1285
6WDB|1|3|U|1286
6WDB|1|3|A|1287
6WDB|1|3|A|1288
6WDB|1|3|A|1289
6WDB|1|3|G|1290
6WDB|1|3|U|1291

Current chains

Chain 3

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S7

Chain N

30S ribosomal protein S9

Chain O

30S ribosomal protein S10

Chain S

30S ribosomal protein S14