IL_6WDC_119
3D structure
- PDB id
- 6WDC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure IV-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDC_119 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.243
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58764.4
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
6WDC|1|3|C|132
6WDC|1|3|U|133
6WDC|1|3|G|134
6WDC|1|3|C|135
6WDC|1|3|C|136
*
6WDC|1|3|G|227
6WDC|1|3|A|228
6WDC|1|3|U|229
6WDC|1|3|G|230
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain U
- 30S ribosomal protein S16
- Chain Y
- 30S ribosomal protein S20
Coloring options: