IL_6WDH_082
3D structure
- PDB id
- 6WDH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.3 Å
Loop
- Sequence
- UUGAUGUGUAGGAUAGG*CCCUUUAA
- Length
- 25 nucleotides
- Bulged bases
- 6WDH|1|1|U|2111, 6WDH|1|1|G|2112, 6WDH|1|1|U|2118
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6WDH|1|1|U|2105
6WDH|1|1|U|2106
6WDH|1|1|G|2107
6WDH|1|1|A|2108
6WDH|1|1|U|2109
6WDH|1|1|G|2110
6WDH|1|1|U|2111
6WDH|1|1|G|2112
6WDH|1|1|U|2113
6WDH|1|1|A|2114
6WDH|1|1|G|2115
6WDH|1|1|G|2116
6WDH|1|1|A|2117
6WDH|1|1|U|2118
6WDH|1|1|A|2119
6WDH|1|1|G|2120
6WDH|1|1|G|2121
*
6WDH|1|1|C|2177
6WDH|1|1|C|2178
6WDH|1|1|C|2179
6WDH|1|1|U|2180
6WDH|1|1|U|2181
6WDH|1|1|U|2182
6WDH|1|1|A|2183
6WDH|1|1|A|2184
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: