IL_6WDH_099

3D structure

PDB id

6WDH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

GUGUUC*GGUAGC

Length

12 nucleotides

Bulged bases

6WDH|1|1|U|2689, 6WDH|1|1|U|2690

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDH|1|1|G|2686
6WDH|1|1|U|2687
6WDH|1|1|G|2688
6WDH|1|1|U|2689
6WDH|1|1|U|2690
6WDH|1|1|C|2691
*
6WDH|1|1|G|2718
6WDH|1|1|G|2719
6WDH|1|1|U|2720
6WDH|1|1|A|2721
6WDH|1|1|G|2722
6WDH|1|1|C|2723

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain c

50S ribosomal protein L3

Chain k

50S ribosomal protein L14

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19