IL_6WDH_181

3D structure

PDB id

6WDH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B1)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CGAGGC*GCUGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDH|1|1|C|1526
6WDH|1|1|G|1527
6WDH|1|1|A|1528
6WDH|1|1|G|1529
6WDH|1|1|G|1530
6WDH|1|1|C|1531
*
6WDH|1|1|G|1540
6WDH|1|1|C|1541
6WDH|1|1|U|1542
6WDH|1|1|G|1543
6WDH|1|1|A|1544
6WDH|1|1|A|1545
6WDH|1|1|G|1546

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain t

50S ribosomal protein L23