IL_6WDI_104

3D structure

PDB id

6WDI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UGUAAGC*GUUGAG

Length

13 nucleotides

Bulged bases

6WDI|1|1|U|2849

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WDI|1|1|U|2847
6WDI|1|1|G|2848
6WDI|1|1|U|2849
6WDI|1|1|A|2850
6WDI|1|1|A|2851
6WDI|1|1|G|2852
6WDI|1|1|C|2853
*
6WDI|1|1|G|2864
6WDI|1|1|U|2865
6WDI|1|1|U|2866
6WDI|1|1|G|2867
6WDI|1|1|A|2868
6WDI|1|1|G|2869

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain n

50S ribosomal protein L17

Chain p

50S ribosomal protein L19