RNA 3D Hub //

6WDI Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6WDI_0061/1/194:201No text annotation
geometric
HL_5J7L_139
NA
HL_6WDI_0081/1/246:252No text annotation
homologous
HL_5J7L_141
NA
HL_6WDI_0111/1/382:392No text annotation
homologous
HL_5J7L_145
NA
HL_6WDI_0121/1/410:417Pseudoknot geometry
homologous
HL_7A0S_014
HL_30680.4
HL_6WDI_0131/1/462:467GNRA
homologous
HL_4WF9_015
HL_34789.1
HL_6WDI_0161/1/566:575T-loop with 2 stacked bulged bases
geometric
HL_5J7L_150
NA
HL_6WDI_0191/1/641:647No text annotation
homologous
HL_5J7L_153
NA
HL_6WDI_0211/1/744:753No text annotation
homologous
HL_4WF9_023
HL_50204.1
HL_6WDI_1111/1/779:785No text annotation
geometric
HL_5J7L_151
NA
HL_6WDI_0231/1/826:831No text annotation
homologous
HL_7RQB_025
NA
HL_6WDI_0261/1/978:985No text annotation
homologous
HL_5J7L_160
NA
HL_6WDI_0321/1/1324:1330Pseudoknot geometry with 3' bulge
homologous
HL_5J7L_166
NA
HL_6WDI_0341/1/1389:1398No text annotation
homologous
HL_7RQB_036
NA
HL_6WDI_0381/1/1565:1568Mini UNCG
homologous
HL_7A0S_039
HL_90436.1
HL_6WDI_0391/1/1612:1619No text annotation
homologous
HL_7RQB_040
NA
HL_6WDI_0401/1/1630:1636GNRA
homologous
HL_5J7L_174
NA
HL_6WDI_0411/1/1691:1696UNCG
geometric
HL_5J7L_011
NA
HL_6WDI_0451/1/1806:1811GNRA related
homologous
HL_5J7L_179
NA
HL_6WDI_0481/1/1949:1957No text annotation
homologous
HL_4WF9_046
HL_61418.1
HL_6WDI_0491/1/2027:2036No text annotation
homologous
HL_4WF9_047
HL_78372.1
HL_6WDI_0521/1/2248:2256No text annotation
homologous
HL_7A0S_052
HL_11974.1
HL_6WDI_0531/1/2264:2276No text annotation
homologous
HL_7RQB_054
NA
HL_6WDI_0551/1/2324:2331Pseudoknot geometry
homologous
HL_5J7L_189
NA
HL_6WDI_0621/1/2594:2599GNRA
homologous
HL_7RQB_063
NA
HL_6WDI_0651/1/2745:2759No text annotation
homologous
HL_4WF9_062
HL_53269.1
HL_6WDI_0671/1/2819:2827No text annotation
homologous
HL_5J7L_201
NA
HL_6WDI_0861/3/726:731GNRA
homologous
HL_5J7L_016
NA
HL_6WDI_1011/3/1515:1520GNRA
homologous
HL_6CZR_103
NA

Problematic loops

#loop idProblemSequence
HL_6WDI_001No text annotation
HL_6WDI_002No text annotation
HL_6WDI_003No text annotation
HL_6WDI_004No text annotation
HL_6WDI_005No text annotation
HL_6WDI_007No text annotation
HL_6WDI_009T-loop with 2 stacked bulged bases
HL_6WDI_010T-loop with unstacked turn
HL_6WDI_014GNRA
HL_6WDI_015Mini UNCG with extended bulge
HL_6WDI_017No text annotation
HL_6WDI_018GNRA
HL_6WDI_020GNRA wlth tandem sheared
HL_6WDI_022No text annotation
HL_6WDI_024No text annotation
HL_6WDI_025GNRA
HL_6WDI_027No text annotation
HL_6WDI_028GNRA wlth tandem sheared
HL_6WDI_029No text annotation
HL_6WDI_030GNRA
HL_6WDI_031T-loop with 2 stacked bulged bases
HL_6WDI_033GNRA
HL_6WDI_035No text annotation
HL_6WDI_036Pseudoknot geometry with 3' bulge
HL_6WDI_037UNCG
HL_6WDI_042No text annotation
HL_6WDI_043No text annotation
HL_6WDI_044No text annotation
HL_6WDI_046GNRA variation
HL_6WDI_047No text annotation
HL_6WDI_050No text annotation
HL_6WDI_051No text annotation
HL_6WDI_054No text annotation
HL_6WDI_112No text annotation
HL_6WDI_056GNRA
HL_6WDI_057GNRA
HL_6WDI_058No text annotation
HL_6WDI_059No text annotation
HL_6WDI_060GNRA variation
HL_6WDI_061No text annotation
HL_6WDI_063GNRA
HL_6WDI_064Ribsomal LSU H95
HL_6WDI_066UNCG variation
HL_6WDI_068GNRA
HL_6WDI_069No text annotation
HL_6WDI_070Mini UNCG
HL_6WDI_071No text annotation
HL_6WDI_072No text annotation
HL_6WDI_073GNRA
HL_6WDI_074GNRA
HL_6WDI_075No text annotation
HL_6WDI_076GNRA related
HL_6WDI_077GNRA with extra cWW
HL_6WDI_113GNRA
HL_6WDI_078No text annotation
HL_6WDI_079UNCG
HL_6WDI_080GNRA
HL_6WDI_081UNCG
HL_6WDI_082GNRA wlth extra near cWW
HL_6WDI_083No text annotation
HL_6WDI_084GNRA-like with tWH
HL_6WDI_085No text annotation
HL_6WDI_087No text annotation
HL_6WDI_088Externally structured
HL_6WDI_089GNRA
HL_6WDI_090GNRA
HL_6WDI_091No text annotation
HL_6WDI_092GNRA
HL_6WDI_093GNRA
HL_6WDI_094T-loop related
HL_6WDI_095No text annotation
HL_6WDI_096GNRA
HL_6WDI_097GNRA
HL_6WDI_098T-loop with 3 stacked bulged bases
HL_6WDI_099No text annotation
HL_6WDI_100UNCG
HL_6WDI_102tRNA D-loop
HL_6WDI_103tRNA anticodon loop
HL_6WDI_104T-loop with 2 stacked bulged bases
HL_6WDI_105No text annotation
HL_6WDI_106tRNA anticodon loop
HL_6WDI_107T-loop with 2 stacked bulged bases
HL_6WDI_108tRNA D-loop
HL_6WDI_109tRNA anticodon loop
HL_6WDI_110T-loop with 2 stacked bulged bases

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6WDI_0011/1/24:30,
1/1/510:516		Triple sheared with non-canonical cWW
homologous
IL_4WF9_001
IL_22311.1
IL_6WDI_0021/1/36:37,
1/1/442:444		Single bulged A
homologous
IL_7RQB_002
NA
IL_6WDI_0061/1/188:194,
1/1/201:208		8x7 Sarcin-Ricin; G-bulge
homologous
IL_7RQB_006
NA
IL_6WDI_0111/1/481:484,
1/1/496:509		No text annotation
geometric
IL_5J7L_255
NA
IL_6WDI_0151/1/672:674,
1/1/806:808		Isolated non-canonical cWW pair
geometric
IL_4LFB_010
IL_01003.1
IL_6WDI_0161/1/674:678,
1/1/799:806		tHW-tHW cross-strand stack
homologous
IL_5J7L_260
NA
IL_6WDI_0171/1/697:698,
1/1/763:765		Single bulged A
homologous
IL_5J7L_261
NA
IL_6WDI_0201/1/738:740,
1/1/757:758		Major groove platform
homologous
IL_4WF9_026
IL_48076.7
IL_6WDI_0211/1/775:777,
1/1/787:791		Multiple bulged bases
homologous
IL_5J7L_265
NA
IL_6WDI_0261/1/862:863,
1/1/913:915		Single bulged G
homologous
IL_5J7L_271
NA
IL_6WDI_0271/1/864:868,
1/1/909:912		C-loop with bulged stacked A's
homologous
IL_5J7L_272
NA
IL_6WDI_0321/1/998:1002,
1/1/1153:1157		UAA/GAN
homologous
IL_5J7L_277
NA
IL_6WDI_0331/1/1004:1011,
1/1/1150:1151		SSU/LSU pseudoknot
geometric
IL_5J7L_278
NA
IL_6WDI_0361/1/1024:1030,
1/1/1124:1140		No text annotation
geometric
IL_5J7L_281
NA
IL_6WDI_0421/1/1196:1198,
1/1/1247:1250		Isolated cWS basepair
homologous
IL_5J7L_286
NA
IL_6WDI_0441/1/1208:1215,
1/1/1234:1238		Kink-turn
homologous
IL_5J7L_288
NA
IL_6WDI_0451/1/1262:1269,
1/1/2011:2017		8x7 Sarcin-Ricin; G-bulge
homologous
IL_5J7L_289
NA
IL_6WDI_0481/1/1351:1355,
1/1/1376:1380		UAA/GAN
homologous
IL_5J7L_292
NA
IL_6WDI_0491/1/1357:1361,
1/1/1370:1374		tSH-tHW-tHS
homologous
IL_5J7L_293
NA
IL_6WDI_0531/1/1437:1440,
1/1/1551:1555		tSH-tHW
homologous
IL_5J7L_297
NA
IL_6WDI_0611/1/1666:1669,
1/1/1993:1994		Major groove platform; stack outside cWW
homologous
IL_7RQB_066
NA
IL_6WDI_1801/1/1666:1674,
1/1/1990:1994		No text annotation
homologous
IL_4WF9_117
IL_80252.1
IL_6WDI_0621/1/1669:1674,
1/1/1990:1993		Intercalated tWH
geometric
IL_7A0S_062
IL_28217.1
IL_6WDI_0661/1/1770:1771,
1/1/1980:1982		Single bulged A
homologous
IL_5J7L_312
NA
IL_6WDI_0671/1/1798:1804,
1/1/1813:1821		Kink-turn related
homologous
IL_5J7L_313
NA
IL_6WDI_0681/1/1837:1840,
1/1/1902:1903		Minor groove platform, major groove intercalation
homologous
IL_5J7L_314
NA
IL_6WDI_0691/1/1841:1842,
1/1/1898:1901		Major groove intercalation
homologous
IL_5J7L_315
NA
IL_6WDI_1821/1/1851:1860,
1/1/1882:1891		No text annotation
homologous
IL_5J7L_387
NA
IL_6WDI_0711/1/1864:1867,
1/1/1874:1878		UAA/GAN related
homologous
IL_5J7L_317
NA
IL_6WDI_0731/1/1934:1945,
1/1/1961:1964		No text annotation
geometric
IL_7A0S_072
IL_04332.3
IL_6WDI_0741/1/2050:2052,
1/1/2617:2618		Major groove platform
homologous
IL_5J7L_320
NA
IL_6WDI_0751/1/2054:2056,
1/1/2612:2615		No text annotation
homologous
IL_5J7L_321
NA
IL_6WDI_0771/1/2070:2071,
1/1/2438:2441		Minor groove platform
homologous
IL_7RQB_081
NA
IL_6WDI_0831/1/2350:2353,
1/1/2364:2367		Double sheared
homologous
IL_4WF9_087
IL_58355.1
IL_6WDI_0841/1/2401:2403,
1/1/2414:2415		No text annotation
geometric
IL_9AXU_122
IL_97561.1
IL_6WDI_0851/1/2453:2454,
1/1/2498:2500		Single stack bend
geometric
IL_4WF9_089
IL_15011.1
IL_6WDI_0901/1/2507:2508,
1/1/2580:2582		Major groove platform
homologous
IL_4WF9_094
IL_46637.1
IL_6WDI_0911/1/2510:2512,
1/1/2574:2578		Isolated non-canonical cWW with bulges
homologous
IL_7RQB_097
NA
IL_6WDI_0921/1/2512:2513,
1/1/2571:2574		No text annotation
geometric
IL_4WF9_096
IL_44609.1
IL_6WDI_0931/1/2522:2523,
1/1/2540:2543		Major groove platform with intercalation
homologous
IL_5J7L_342
NA
IL_6WDI_0951/1/2636:2640,
1/1/2774:2782		tSH-tHS-tHW
homologous
IL_5J7L_345
NA
IL_6WDI_0971/1/2680:2684,
1/1/2725:2727		C-loop
homologous
IL_5J7L_347
NA
IL_6WDI_0981/1/2687:2691,
1/1/2718:2722		UAA/GAN related, with intercalation
homologous
IL_4WF9_102
IL_82016.1
IL_6WDI_0991/1/2695:2696,
1/1/2711:2714		Multiple bulged bases
homologous
IL_4WF9_103
IL_44609.1
IL_6WDI_1001/1/2737:2742,
1/1/2762:2767		UAA/GAN with extra cWW
homologous
IL_7A0S_098
IL_91079.1
IL_6WDI_1031/1/2843:2846,
1/1/2870:2874		Multiple bulged bases with non-canonical cWW
homologous
IL_5J7L_353
NA
IL_6WDI_1861/1/2847:2852,
1/1/2865:2869		tHS double platform
homologous
IL_5J7L_354
NA
IL_6WDI_1221/3/242:247,
1/3/277:284		Kink-turn with non-sequential stacking
homologous
IL_5J7L_014
NA
IL_6WDI_1361/3/594:596,
1/3/644:645		Major groove platform
homologous
IL_5J7L_028
NA
IL_6WDI_1451/3/779:783,
1/3/799:803		tSH-tHW-tHS
geometric
IL_4LFB_033
IL_05821.1
IL_6WDI_1471/3/922:923,
1/3/1393:1395		Single bulged A
homologous
IL_5J7L_039
NA
IL_6WDI_1661/3/1399:1401,
1/3/1501:1504		No text annotation
homologous
IL_5J7L_058
NA

Problematic loops

#loop idProblemSequence
IL_6WDI_003Minor groove platform
IL_6WDI_004No text annotation
IL_6WDI_005Single stack bend
IL_6WDI_0077x6 Sarcin-Ricin; G-bulge
IL_6WDI_008No text annotation
IL_6WDI_009No text annotation
IL_6WDI_010No text annotation
IL_6WDI_012Double sheared
IL_6WDI_013Isolated non-canonical cWW pair
IL_6WDI_014AAA cross-strand stack
IL_6WDI_018Single bulged G
IL_6WDI_019Triple sheared
IL_6WDI_02290 degree turn
IL_6WDI_023Stack outside cWW
IL_6WDI_024Single stack bend
IL_6WDI_0257x7 Sarcin-Ricin with intercalated A; G-bulge
IL_6WDI_176Tandem non-canonical cWW pairs
IL_6WDI_028Isolated non-canonical cWW pair
IL_6WDI_029Double sheared with non-canonical cWW
IL_6WDI_030No text annotation
IL_6WDI_177Isolated non-canonical cWW with bulges
IL_6WDI_031Single bulged C
IL_6WDI_034Single bulged U
IL_6WDI_035Kink-turn related
IL_6WDI_037Isolated non-canonical cWW pair
IL_6WDI_038Tandem non-canonical cWW pairs
IL_6WDI_039Kink-turn
IL_6WDI_040No text annotation
IL_6WDI_041Major groove platform
IL_6WDI_178No text annotation
IL_6WDI_043No text annotation
IL_6WDI_046Major groove platform; stack outside cWW
IL_6WDI_047C-loop
IL_6WDI_050No text annotation
IL_6WDI_051UAA/GAN
IL_6WDI_052Tandem non-canonical cWW pairs
IL_6WDI_054No text annotation
IL_6WDI_0555x5 Sarcin-Ricin with intercalated A; G-bulge
IL_6WDI_179tSH-tHW-tHS
IL_6WDI_056180 degree turn
IL_6WDI_057Single bulged A
IL_6WDI_192UAA/GAN variation
IL_6WDI_058No text annotation
IL_6WDI_059No text annotation
IL_6WDI_060Isolated tWW turn
IL_6WDI_063tSH-tSH-tHH-tHS
IL_6WDI_0646x5 Sarcin-Ricin; G-bulge
IL_6WDI_181Triple sheared
IL_6WDI_065Triple sheared with non-canonical cWW
IL_6WDI_070Major groove minor groove platform; mini C-loop
IL_6WDI_072Bulged stacked bases
IL_6WDI_076Single bulged U
IL_6WDI_078Isolated tHS basepair with bulges
IL_6WDI_079Isolated non-canonical cWW pair
IL_6WDI_080Tandem non-canonical cWW pairs
IL_6WDI_193Isolated non-canonical cWW pair
IL_6WDI_081No text annotation
IL_6WDI_183No text annotation
IL_6WDI_082Single bulged U
IL_6WDI_086Major groove platform
IL_6WDI_087Major groove platform with extra pair
IL_6WDI_184Major groove platform
IL_6WDI_088Major groove minor groove platform with extra cWW
IL_6WDI_089Double sheared with non-canonical cWW
IL_6WDI_185No text annotation
IL_6WDI_094Single bulged A
IL_6WDI_096Sarcin-Ricin target in LSU H95; G-bulge
IL_6WDI_101No text annotation
IL_6WDI_102Major groove intercalation
IL_6WDI_104No text annotation
IL_6WDI_105Major groove intercalation
IL_6WDI_106No text annotation
IL_6WDI_107Major groove minor groove platform; mini C-loop
IL_6WDI_108Bacterial 5S Loop E
IL_6WDI_109Single bulged G
IL_6WDI_110Single bulged A
IL_6WDI_111No text annotation
IL_6WDI_112Minor groove platform
IL_6WDI_113Multiple bulged bases
IL_6WDI_114Minor groove platform with extra cWW
IL_6WDI_115Minor groove platform
IL_6WDI_194Single bulged G
IL_6WDI_116No text annotation
IL_6WDI_117Isolated non-canonical cWW pair
IL_6WDI_118Minor groove platform related
IL_6WDI_119Isolated cWH basepair
IL_6WDI_120tWH-tWH-tHW-tHW
IL_6WDI_121Minor groove platform
IL_6WDI_123No text annotation
IL_6WDI_187No text annotation
IL_6WDI_124C-loop
IL_6WDI_125Single bulged U
IL_6WDI_126C-loop
IL_6WDI_127Single bulged G
IL_6WDI_128No text annotation
IL_6WDI_129No text annotation
IL_6WDI_130tSH-tHW-tWW
IL_6WDI_131No text annotation
IL_6WDI_132SSU/LSU pseudoknot
IL_6WDI_133Kink-turn related
IL_6WDI_134No text annotation
IL_6WDI_135tSH-tHW-tHS
IL_6WDI_137Major groove minor groove platform; mini C-loop
IL_6WDI_138No text annotation
IL_6WDI_139Major groove platform; stack outside cWW
IL_6WDI_140Single stack bend
IL_6WDI_141Tandem non-canonical cWW pairs
IL_6WDI_188Triple non-canonical cWW pairs
IL_6WDI_142No text annotation
IL_6WDI_143Kink-turn
IL_6WDI_189Left turn
IL_6WDI_144Other IL
IL_6WDI_1468x6 Sarcin-Ricin with inserted Y; G-bulge
IL_6WDI_148Single bulged G
IL_6WDI_149Minor groove platform
IL_6WDI_150No text annotation
IL_6WDI_151Minor groove platform
IL_6WDI_152Single stack bend
IL_6WDI_153No text annotation
IL_6WDI_154Single bulged U
IL_6WDI_155Isolated cWS basepair
IL_6WDI_190Minor groove platform
IL_6WDI_156No text annotation
IL_6WDI_157Single bulged A
IL_6WDI_158Isolated non-canonical cWW pair
IL_6WDI_159No text annotation
IL_6WDI_160Minor groove platform
IL_6WDI_161No text annotation
IL_6WDI_162No text annotation
IL_6WDI_191No text annotation
IL_6WDI_163180 degree turn
IL_6WDI_164Double sheared with non-canonical cWW
IL_6WDI_165No text annotation
IL_6WDI_167No text annotation
IL_6WDI_168Isolated non-canonical cWW pair
IL_6WDI_169Decoding loop related
IL_6WDI_170Isolated non-canonical cWW pair
IL_6WDI_171Double sheared
IL_6WDI_172Triple sheared related
IL_6WDI_173Single bulged A
IL_6WDI_174No text annotation
IL_6WDI_175Single stack bend

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6WDI_0011/1/30:31,
1/1/474:481,
1/1/509:510		No text annotation
homologous
J3_7RQB_001
NA
J3_6WDI_0271/1/30:31,
1/1/474:484,
1/1/496:510		No text annotation
homologous
J3_5J7L_066
NA
J3_6WDI_0281/1/32:35,
1/1/445:461,
1/1/468:473		No text annotation
homologous
J3_5J7L_067
NA
J3_6WDI_0021/1/56:57,
1/1/70:76,
1/1/110:114		No text annotation
homologous
J3_5J7L_037
NA
J3_6WDI_0371/1/297:301,
1/1/316:325,
1/1/337:341		No text annotation
homologous
J3_5J7L_068
NA
J3_6WDI_0031/1/683:689,
1/1/773:775,
1/1/791:794		No text annotation
homologous
J3_5J7L_038
NA
J3_6WDI_0041/1/698:700,
1/1/732:736,
1/1/760:763		No text annotation
homologous
J3_7RQB_005
NA
J3_6WDI_0061/1/1298:1303,
1/1/1625:1627,
1/1/1639:1642		No text annotation
homologous
J3_5J7L_041
NA
J3_6WDI_0071/1/1306:1309,
1/1/1605:1611,
1/1/1620:1622		No text annotation
homologous
J3_7A0S_007
J3_47341.1
J3_6WDI_0081/1/1344:1349,
1/1/1382:1385,
1/1/1402:1403		No text annotation
homologous
J3_5J7L_043
NA
J3_6WDI_0301/1/1424:1429,
1/1/1564:1565,
1/1/1568:1574		No text annotation
homologous
J3_5J7L_069
NA
J3_6WDI_0091/1/2091:2093,
1/1/2196:2200,
1/1/2223:2228		Kink-turn 3-way junction
homologous
J3_5J7L_044
NA
J3_6WDI_0311/1/2282:2284,
1/1/2384:2395,
1/1/2421:2427		No text annotation
homologous
J3_5J7L_070
NA
J3_6WDI_0111/1/2517:2520,
1/1/2545:2547,
1/1/2561:2567		No text annotation
homologous
J3_5J7L_046
NA
J3_6WDI_0131/1/2812:2815,
1/1/2831:2836,
1/1/2882:2888		No text annotation
homologous
J3_5J7L_048
NA
J3_6WDI_0211/3/955:962,
1/3/973:984,
1/3/1221:1225		No text annotation
homologous
J3_5J7L_006
NA
J4_6WDI_0021/1/601:604,
1/1/624:628,
1/1/635:638,
1/1/650:656		No text annotation
homologous
J4_5J7L_020
NA
J4_6WDI_0031/1/1270:1276,
1/1/1294:1295,
1/1/1645:1648,
1/1/2009:2010		No text annotation
homologous
J4_5J7L_021
NA
J4_6WDI_0041/1/1310:1314,
1/1/1338:1343,
1/1/1404:1405,
1/1/1597:1604		No text annotation
homologous
J4_5J7L_022
NA
J4_6WDI_0051/1/1313:1314,
1/1/1338:1343,
1/1/1404:1405,
1/1/1597:1603		No text annotation
homologous
J4_5J7L_023
NA
J4_6WDI_0071/1/1772:1776,
1/1/1788:1792,
1/1/1827:1830,
1/1/1975:1979		No text annotation
homologous
J4_4WF9_007
J4_61477.6
J4_6WDI_0081/1/1833:1835,
1/1/1905:1906,
1/1/1924:1933,
1/1/1967:1972		No text annotation
homologous
J4_9DFE_008
J4_42306.1
J4_6WDI_0101/1/2643:2646,
1/1/2674:2676,
1/1/2731:2735,
1/1/2769:2771		No text annotation
homologous
J4_5J7L_028
NA
J4_6WDI_0131/3/575:577,
1/3/764:769,
1/3/810:821,
1/3/879:880		No text annotation
homologous
J4_5J7L_003
NA
J5_6WDI_0011/1/47:54,
1/1/116:121,
1/1/130:131,
1/1/148:150,
1/1/176:178		No text annotation
homologous
J5_5J7L_013
NA
J5_6WDI_0021/1/531:533,
1/1/560:564,
1/1/577:579,
1/1/1261:1262,
1/1/2017:2018		No text annotation
homologous
J5_5J7L_014
NA
J5_6WDI_0031/1/584:589,
1/1/668:671,
1/1/809:812,
1/1/1195:1196,
1/1/1250:1256		No text annotation
homologous
J5_5J7L_015
NA
J5_6WDI_0041/1/1674:1682,
1/1/1706:1707,
1/1/1751:1752,
1/1/1756:1764,
1/1/1988:1990		No text annotation
homologous
J5_5J7L_016
NA
J5_6WDI_0051/1/2057:2064,
1/1/2446:2453,
1/1/2500:2507,
1/1/2582:2588,
1/1/2606:2611		No text annotation
J5_6WDI_0061/1/2074:2077,
1/1/2243:2246,
1/1/2258:2259,
1/1/2281:2282,
1/1/2427:2435		No text annotation
homologous
J5_4WF9_007
J5_39529.2
J5_6WDI_0091/3/58:61,
1/3/106:113,
1/3/314:316,
1/3/337:339,
1/3/350:354		No text annotation
homologous
J5_6CZR_021
NA
J6_6WDI_0021/1/2074:2077,
1/1/2243:2246,
1/1/2258:2259,
1/1/2281:2284,
1/1/2384:2395,
1/1/2421:2435		No text annotation
J7_6WDI_0011/1/8:15,
1/1/525:531,
1/1/2018:2023,
1/1/2040:2043,
1/1/2625:2630,
1/1/2788:2789,
1/1/2894:2895		No text annotation
J7_6WDI_0021/1/817:822,
1/1/835:838,
1/1/940:946,
1/1/971:976,
1/1/987:991,
1/1/1163:1164,
1/1/1185:1190		No text annotation

Problematic loops

#loop idProblemSequence
J3_6WDI_029No text annotation
J3_6WDI_005No text annotation
J3_6WDI_010No text annotation
J3_6WDI_012No text annotation
J3_6WDI_032No text annotation
J3_6WDI_014No text annotation
J3_6WDI_015No text annotation
J3_6WDI_033No text annotation
J3_6WDI_016No text annotation
J3_6WDI_034No text annotation
J3_6WDI_017No text annotation
J3_6WDI_018No text annotation
J3_6WDI_019No text annotation
J3_6WDI_020No text annotation
J3_6WDI_022No text annotation
J3_6WDI_035No text annotation
J3_6WDI_023No text annotation
J3_6WDI_038No text annotation
J3_6WDI_024No text annotation
J3_6WDI_025No text annotation
J3_6WDI_036No text annotation
J3_6WDI_026No text annotation
J4_6WDI_001No text annotation
J4_6WDI_006No text annotation
J4_6WDI_009No text annotation
J4_6WDI_011No text annotation
J4_6WDI_012No text annotation
J4_6WDI_014tRNA junction
J4_6WDI_015tRNA junction
J4_6WDI_016tRNA junction
J5_6WDI_007No text annotation
J5_6WDI_008No text annotation
J6_6WDI_001No text annotation

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