IL_6WDI_128
3D structure
- PDB id
- 6WDI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure IV-B2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UGAAGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDI_128 not in the Motif Atlas
- Homologous match to IL_5J7L_020
- Geometric discrepancy: 0.1708
- The information below is about IL_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28026.3
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
6WDI|1|3|U|409
6WDI|1|3|G|410
6WDI|1|3|A|411
6WDI|1|3|A|412
6WDI|1|3|G|413
6WDI|1|3|A|414
6WDI|1|3|A|415
6WDI|1|3|G|416
*
6WDI|1|3|U|427
6WDI|1|3|G|428
6WDI|1|3|U|429
6WDI|1|3|A|430
6WDI|1|3|A|431
6WDI|1|3|A|432
6WDI|1|3|G|433
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain I
- 30S ribosomal protein S4
Coloring options: