IL_6WDK_144
3D structure
- PDB id
- 6WDK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Non-cognate Structure V-A2)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 6WDK|1|3|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WDK_144 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.1841
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
6WDK|1|3|G|683
6WDK|1|3|U|684
6WDK|1|3|G|685
6WDK|1|3|U|686
6WDK|1|3|A|687
6WDK|1|3|G|688
*
6WDK|1|3|C|699
6WDK|1|3|G|700
6WDK|1|3|U|701
6WDK|1|3|A|702
6WDK|1|3|G|703
6WDK|1|3|A|704
6WDK|1|3|G|705
6WDK|1|3|A|706
6WDK|1|3|U|707
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain P
- 30S ribosomal protein S11
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