IL_6WLU_019

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

GAA*UC

Length

5 nucleotides

Bulged bases

6WLU|2|A|A|151

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WLU_019 not in the Motif Atlas

Geometric match to IL_3OXE_001

Geometric discrepancy: 0.0723

The information below is about IL_3OXE_001

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

175

Unit IDs

6WLU|2|A|G|150
6WLU|2|A|A|151
6WLU|2|A|A|152
*
6WLU|2|A|U|165
6WLU|2|A|C|166

Current chains

Chain A

RNA (231-MER)

Nearby chains