IL_6WLU_169

3D structure

PDB id

6WLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

V. cholerae glycine riboswitch with glycine models, 5.7 Angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

5.7 Å

Loop

Sequence

CGAAG*CAG

Length

8 nucleotides

Bulged bases

6WLU|17|A|A|171

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6WLU_169 not in the Motif Atlas

Geometric match to IL_3OXE_002

Geometric discrepancy: 0.0434

The information below is about IL_3OXE_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70784.2

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

7

Unit IDs

6WLU|17|A|C|169
6WLU|17|A|G|170
6WLU|17|A|A|171
6WLU|17|A|A|172
6WLU|17|A|G|173
*
6WLU|17|A|C|208
6WLU|17|A|A|209
6WLU|17|A|G|210

Current chains

Chain A

RNA (231-MER)

Nearby chains