IL_6WNT_043

3D structure

PDB id

6WNT (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit without free 5S rRNA and perturbed PTC

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCAGACAGC*GUCGAG

Length

16 nucleotides

Bulged bases

6WNT|1|4|A|1174

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6WNT|1|4|C|1171
6WNT|1|4|C|1172
6WNT|1|4|C|1173
6WNT|1|4|A|1174
6WNT|1|4|G|1175
6WNT|1|4|A|1176
6WNT|1|4|C|1177
6WNT|1|4|A|1178
6WNT|1|4|G|1179
6WNT|1|4|C|1180
*
6WNT|1|4|G|1235
6WNT|1|4|U|1236
6WNT|1|4|C|1237
6WNT|1|4|G|1238
6WNT|1|4|A|1239
6WNT|1|4|G|1240

Current chains

Chain 4

23s-5s joint ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L36

Chain f

50S ribosomal protein L6

Chain h

50S ribosomal protein L10