IL_6WNV_070
3D structure
- PDB id
- 6WNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome without free 5S rRNA and with a perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUAAG*CGUUAUAAC
- Length
- 14 nucleotides
- Bulged bases
- 6WNV|1|4|U|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNV_070 not in the Motif Atlas
- Homologous match to IL_9DFE_004
- Geometric discrepancy: 0.4689
- The information below is about IL_9DFE_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_71972.1
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
6WNV|1|4|G|81
6WNV|1|4|U|82
6WNV|1|4|A|83
6WNV|1|4|A|84
6WNV|1|4|G|85
*
6WNV|1|4|C|97
6WNV|1|4|G|98
6WNV|1|4|U|99
6WNV|1|4|U|100
6WNV|1|4|A|101
6WNV|1|4|U|102
6WNV|1|4|A|103
6WNV|1|4|A|104
6WNV|1|4|C|105
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain u
- 50S ribosomal protein L24
- Chain y
- 50S ribosomal protein L29
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