IL_6WNV_098
3D structure
- PDB id
- 6WNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome without free 5S rRNA and with a perturbed PTC
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6WNV|1|4|A|1284
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6WNV_098 not in the Motif Atlas
- Geometric match to IL_4WF9_036
- Geometric discrepancy: 0.0978
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
6WNV|1|4|C|998
6WNV|1|4|U|999
6WNV|1|4|A|1000
6WNV|1|4|A|1001
6WNV|1|4|G|1002
*
6WNV|1|4|C|1281
6WNV|1|4|G|1282
6WNV|1|4|A|1283
6WNV|1|4|A|1284
6WNV|1|4|G|1285
Current chains
- Chain 4
- 23s-5s joint ribosomal RNA
Nearby chains
- Chain q
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L21
- Chain z
- 50S ribosomal protein L30
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